[SEDANAL] installation of sedanal
Walter Stafford
wstafford3 at walterstafford.com
Wed Oct 21 13:39:21 PDT 2015
It should generate an empty Model file to which you have to add your models by selecting the Model Editor either from the main menu or the fitter control screen.
Here is an example file to get you started: put it in the ModelEditor folder. And make sure the Preferences are pointing to it. It probably doesn;t have the model yoiu want, but you can new models to it. Check out the User Manual.
Walter Stafford
wstafford3 at walterstafford.com
"Twenty years from now, you will be more disappointed by the things you didn't do than those you did.
So throw off the bowlines. Sail away from safe harbor.
Catch the wind in your sails. Explore. Dream. Discover." — Mark Twain, Great American Writer
On Oct 21, 2015, at 16:31, Ferreon, Josephine Chu <Josephine.Ferreon at bcm.edu> wrote:
> Hi Walter,
> Thanks for the fast response.
> Yes, it is v6.01. I actually manually created the MethodEditor and User_data subdirectories.
> It is asking for ModelInfo.txt. Where do I get that?
> Thanks,
> Josephine
>
>
> From: Walter Stafford [mailto:wstafford3 at walterstafford.com]
> Sent: Wednesday, October 21, 2015 3:26 PM
> To: Ferreon, Josephine Chu
> Cc: sedanal at lists.sedanal.org
> Subject: Re: [SEDANAL] installation of sedanal
>
> Hi Josephine,
>
> I assume you are using v6.01. That version - in spite of what the User manual says - does not require the DLL. What other files is it saying your need?
>
> The first time you set it up you will have to create new model editor file and tell SEDANAL where to find it and the user data directories. Go to the Preferences to do that.
>
>
> Walter Stafford
> wstafford3 at walterstafford.com
>
> "Twenty years from now, you will be more disappointed by the things you didn't do than those you did.
> So throw off the bowlines. Sail away from safe harbor.
> Catch the wind in your sails. Explore. Dream. Discover." — Mark Twain, Great American Writer
>
> On Oct 21, 2015, at 16:21, Ferreon, Josephine Chu <Josephine.Ferreon at bcm.edu> wrote:
>
>
> Hello,
> I am a new user and I am having issues installing sedanal in Windows 7 professional. Sedanal is complaining of files not found. I couldn’t find the dll file too that is supposed to be in the zip program provided.
> Please help.
> Thanks,
> Josephine Ferreon
>
>
> _______________________________________________
> SEDANAL mailing list
> SEDANAL at lists.sedanal.org
> http://lists.sedanal.org/listinfo.cgi/sedanal-sedanal.org
>
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// File C:\SEDANAL\ModelEditor\ModelInfo.txt contains model information for SedAnal. Last modified Fri Oct 02 15:17:31 2015
// Written by SedAnal v6.27.11076 x64 x64 2015-9-2 ; do not attempt to edit this file unless you know what you are doing
14 // version number of this file format
*MODEL001 New 0 0 0-----------------------------------------------------------
"1 comp" "" "" // name and alternate names of the model
"" // comments
2015-5-27 18:40:59 // date/time last stored
0 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
*MODEL002 New 0 0 0-----------------------------------------------------------
"A+B=C" "" "" // name and alternate names of the model
"" // comments
2015-6-16 15:58:19 // date/time last stored
1 3 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"A" // default name for species 1
"B" // default name for species 2
"C" // default name for species 3
"A + B = C" 1 5 // name, group, analytic solution for its group, for reaction 1
-1 -1 1 // stoichiometry for reaction 1
// Kinetic parameters
0 0 1.0000000000000000e+015 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) M(2) M(3) s(1) s(2) s(3) d(0, 1) d(0, 2) d(0, 3) e(0, 1) e(0, 2) e(0, 3)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) M(2) M(3) d(0, 1) d(0, 2) d(0, 3) e(0, 1) e(0, 2) e(0, 3)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 -1 1 0
Cons 2 1 0 1
Rxn 1 Species 3 1 | 1 1 -1
dc 1/ 1 1 0 | 0 0 0
dc 1/ 2 0 0 | 0 0 0
dc 2/ 1 0 0 | 0 0 0
dc 2/ 2 1 0 | 0 0 0
dc 3/ 1 1 1 | 0 1 0
dc 3/ 2 1 1 | 1 0 0
*MODEL003 New 0 0 0-----------------------------------------------------------
"4A=A4" "" "" // name and alternate names of the model
"" // comments
2015-6-16 16:17:36 // date/time last stored
1 2 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
-4 1 // stoichiometry for reaction 1
// Kinetic parameters
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) s(1) s(2) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (3,64)
M(2)=4*M(1)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (3,64)
M(2)=4*M(1)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/4 1
Rxn 1 Species 2 1 | 4 -1
dc 1/ 1 1 0 | 0 0
dc 2/ 1 4 1 | 3 0
*MODEL004 New 0 0 0-----------------------------------------------------------
"4A=A4 ideal" "" "" // name and alternate names of the model
"" // comments
2015-6-16 16:18:21 // date/time last stored
1 2 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
-4 1 // stoichiometry for reaction 1
// Kinetic parameters
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) M(2) s(1) s(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/4 1
Rxn 1 Species 2 1 | 4 -1
dc 1/ 1 1 0 | 0 0
dc 2/ 1 4 1 | 3 0
*MODEL004 Edited 0 0 0-----------------------------------------------------------
"4A=A4 ideal" "" "" // name and alternate names of the model
"" // comments
2015-6-16 16:23:53 // date/time last stored
1 2 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
-4 1 // stoichiometry for reaction 1
// Kinetic parameters
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 1 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) M(2) s(1) s(2) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (2,52)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 1 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) M(2) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (2,52)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/4 1
Rxn 1 Species 2 1 | 4 -1
dc 1/ 1 1 0 | 0 0
dc 2/ 1 4 1 | 3 0
*MODEL004 Edited 0 0 0-----------------------------------------------------------
"4A=A4 ideal" "" "" // name and alternate names of the model
"" // comments
2015-6-16 16:24:28 // date/time last stored
1 2 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
-4 1 // stoichiometry for reaction 1
// Kinetic parameters
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) s(1) s(2) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (3,64)
M(2)=4*M(1)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (3,64)
M(2)=4*M(1)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/4 1
Rxn 1 Species 2 1 | 4 -1
dc 1/ 1 1 0 | 0 0
dc 2/ 1 4 1 | 3 0
*MODEL005 New 0 0 0-----------------------------------------------------------
"TNFa + 3R1" "" "" // name and alternate names of the model
"" // comments
2015-6-16 16:33:13 // date/time last stored
3 5 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"TNFa" // default name for species 1
"R1" // default name for species 2
"TNFaR1" // default name for species 3
"TNFaR12" // default name for species 4
"TNFaR13" // default name for species 5
"TNFa + R1 = TNFaR1" 1 0 // name, group, analytic solution for its group, for reaction 1
"R1 + TNFaR1 = TNFaR12" 1 0 // name, group, analytic solution for its group, for reaction 2
"R1 + TNFaR12 = TNFaR13" 1 0 // name, group, analytic solution for its group, for reaction 3
-1 -1 1 0 0 // stoichiometry for reaction 1
0 -1 -1 1 0 // stoichiometry for reaction 2
0 -1 0 -1 1 // stoichiometry for reaction 3
// Kinetic parameters
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 2, copy kr from rxn
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 3, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 3, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 3, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
3 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
4 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) s(1) s(2) s(3) s(4) s(5) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 3 -1 2 1 0
Cons 2 -2 1 -1 0 1
Rxn 1 Species 3 1 0 0 | 1 1 -1 0 0
Rxn 2 Species 4 1 1 0 | 1 2 0 -1 0
Rxn 3 Species 5 1 1 1 | 1 3 0 0 -1
dc 1/ 1 1 0 0 0 | 0 0 0 0 0
dc 1/ 2 0 0 0 0 | 0 0 0 0 0
dc 2/ 1 0 0 0 0 | 0 0 0 0 0
dc 2/ 2 1 0 0 0 | 0 0 0 0 0
dc 3/ 1 1 1 0 0 | 0 1 0 0 0
dc 3/ 2 1 1 0 0 | 1 0 0 0 0
dc 4/ 1 1 1 1 0 | 0 2 0 0 0
dc 4/ 2 2 1 1 0 | 1 1 0 0 0
dc 5/ 1 1 1 1 1 | 0 3 0 0 0
dc 5/ 2 3 1 1 1 | 1 2 0 0 0
*MODEL006 New 0 0 0-----------------------------------------------------------
"isodesmic" "" "" // name and alternate names of the model
"" // comments
2015-7-4 12:30:42 // date/time last stored
0 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
*MODEL006 Edited 0 0 0-----------------------------------------------------------
"isodesmic" "" "" // name and alternate names of the model
"" // comments
2015-7-5 12:12:18 // date/time last stored
0 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
*MODEL006 Edited 0 0 0-----------------------------------------------------------
"isodesmic" "" "" // name and alternate names of the model
"" // comments
2015-7-6 17:39:04 // date/time last stored
1 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A + A = A2 / A2 + A = A3 / ..." 1 8 // name, group, analytic solution for its group, for reaction 1
-128 // stoichiometry for reaction 1
// Kinetic parameters
0 0 0.0000000000000000e+000 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 0.0000000000000000e+000 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 0.0000000000000000e+000 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 1
Rxn 1 Species 2 1 | 1
dc 1/ 1 1 0 | 0
*MODEL006 Edited 0 0 0-----------------------------------------------------------
"isodesmic" "" "" // name and alternate names of the model
"" // comments
2015-7-6 17:39:34 // date/time last stored
1 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A + A = A2 / A2 + A = A3 / ..." 1 8 // name, group, analytic solution for its group, for reaction 1
-128 // stoichiometry for reaction 1
// Kinetic parameters
0 0 0.0000000000000000e+000 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 0.0000000000000000e+000 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 0.0000000000000000e+000 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 1
Rxn 1 Species 2 1 | 1
dc 1/ 1 1 0 | 0
*MODEL006 Edited 0 0 0-----------------------------------------------------------
"isodesmic" "" "" // name and alternate names of the model
"" // comments
2015-7-6 17:41:16 // date/time last stored
1 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A + A = A2 / A2 + A = A3 / ..." 1 8 // name, group, analytic solution for its group, for reaction 1
-128 // stoichiometry for reaction 1
// Kinetic parameters
0 1e-020 1.0000000000000000e+010 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 0.0000000000000000e+000 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 0.0000000000000000e+000 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 1
Rxn 1 Species 2 1 | 1
dc 1/ 1 1 0 | 0
*MODEL007 New 0 0 0-----------------------------------------------------------
"AB" "" "" // name and alternate names of the model
"" // comments
2015-7-2 15:04:13 // date/time last stored
0 2 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"A" // default name for species 1
"B" // default name for species 2
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) M(2) s(1) s(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 0
Cons 2 0 1
dc 1/ 1 1 | 0 0
dc 1/ 2 0 | 0 0
dc 2/ 1 0 | 0 0
dc 2/ 2 1 | 0 0
*MODEL007 Edited 0 0 0-----------------------------------------------------------
"AB" "" "" // name and alternate names of the model
"" // comments
2015-7-6 19:42:46 // date/time last stored
0 2 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"A" // default name for species 1
"B" // default name for species 2
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) M(2) s(1) s(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 0
Cons 2 0 1
dc 1/ 1 1 | 0 0
dc 1/ 2 0 | 0 0
dc 2/ 1 0 | 0 0
dc 2/ 2 1 | 0 0
*MODEL008 New 0 0 0-----------------------------------------------------------
"ABC" "" "" // name and alternate names of the model
"" // comments
2015-8-6 10:13:18 // date/time last stored
0 3 4 3 3 // reactions, species, params/species (vel), params/species (eq), components
1 2 3 // species numbers of components
"A" // default name for species 1
"B" // default name for species 2
"C" // default name for species 3
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) M(2) M(3) s(1) s(2) s(3) d(0, 1) d(0, 2) d(0, 3) e(0, 1) e(0, 2) e(0, 3)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) M(2) M(3) d(0, 1) d(0, 2) d(0, 3) e(0, 1) e(0, 2) e(0, 3)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 0 0
Cons 2 0 1 0
Cons 3 0 0 1
dc 1/ 1 1 | 0 0 0
dc 1/ 2 0 | 0 0 0
dc 1/ 3 0 | 0 0 0
dc 2/ 1 0 | 0 0 0
dc 2/ 2 1 | 0 0 0
dc 2/ 3 0 | 0 0 0
dc 3/ 1 0 | 0 0 0
dc 3/ 2 0 | 0 0 0
dc 3/ 3 1 | 0 0 0
*MODEL001 Edited 0 0 0-----------------------------------------------------------
"1 comp" "" "" // name and alternate names of the model
"" // comments
2015-8-19 13:47:44 // date/time last stored
0 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0 1.0000000000000000e+008
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
*MODEL009 New 0 0 0-----------------------------------------------------------
"BSA" "" "" // name and alternate names of the model
"" // comments
2015-9-2 09:00:56 // date/time last stored
0 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
*MODEL009 Edited 0 0 0-----------------------------------------------------------
"BSA" "" "" // name and alternate names of the model
"" // comments
2015-9-2 09:02:22 // date/time last stored
0 3 4 3 3 // reactions, species, params/species (vel), params/species (eq), components
1 2 3 // species numbers of components
"A" // default name for species 1
"B" // default name for species 2
"C" // default name for species 3
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) M(2) M(3) s(1) s(2) s(3) d(0, 1) d(0, 2) d(0, 3) e(0, 1) e(0, 2) e(0, 3)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) M(2) M(3) d(0, 1) d(0, 2) d(0, 3) e(0, 1) e(0, 2) e(0, 3)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 0 0
Cons 2 0 1 0
Cons 3 0 0 1
dc 1/ 1 1 | 0 0 0
dc 1/ 2 0 | 0 0 0
dc 1/ 3 0 | 0 0 0
dc 2/ 1 0 | 0 0 0
dc 2/ 2 1 | 0 0 0
dc 2/ 3 0 | 0 0 0
dc 3/ 1 0 | 0 0 0
dc 3/ 2 0 | 0 0 0
dc 3/ 3 1 | 0 0 0
*MODEL010 New 0 0 0-----------------------------------------------------------
"2 comp" "" "" // name and alternate names of the model
"" // comments
2015-9-5 15:39:59 // date/time last stored
0 2 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"A" // default name for species 1
"B" // default name for species 2
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) M(2) s(1) s(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1 0
Cons 2 0 1
dc 1/ 1 1 | 0 0
dc 1/ 2 0 | 0 0
dc 2/ 1 0 | 0 0
dc 2/ 2 1 | 0 0
*MODEL011 Edited 0 0 0-----------------------------------------------------------
"A (imported)" "" "" // name and alternate names of the model
"" // comments
2015-9-16 13:07:49 // date/time last stored
0 1 4 3 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
*MODEL012 Edited 0 0 0-----------------------------------------------------------
"TNFa + 3R1 (imported)" "" "" // name and alternate names of the model
"" // comments
2015-9-16 17:03:04 // date/time last stored
3 5 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"TNFa" // default name for species 1
"R1" // default name for species 2
"TNFa(R1)" // default name for species 3
"TNFa(R1)2" // default name for species 4
"TNFa(R1)3" // default name for species 5
"TNFa + R1 = TNFa(R1)" 1 0 // name, group, analytic solution for its group, for reaction 1
"R1 + TNFa(R1) = TNFa(R1)2" 1 0 // name, group, analytic solution for its group, for reaction 2
"R1 + TNFa(R1)2 = TNFa(R1)3" 1 0 // name, group, analytic solution for its group, for reaction 3
-1 -1 1 0 0 // stoichiometry for reaction 1
0 -1 -1 1 0 // stoichiometry for reaction 2
0 -1 0 -1 1 // stoichiometry for reaction 3
// Kinetic parameters
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 1, copy kr from rxn
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 2, copy kr from rxn
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 3, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 3, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 3, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
3 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
4 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) s(1) s(2) s(3) s(4) s(5) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 3 -1 2 1 0
Cons 2 -2 1 -1 0 1
Rxn 1 Species 3 1 0 0 | 1 1 -1 0 0
Rxn 2 Species 4 1 1 0 | 1 2 0 -1 0
Rxn 3 Species 5 1 1 1 | 1 3 0 0 -1
dc 1/ 1 1 0 0 0 | 0 0 0 0 0
dc 1/ 2 0 0 0 0 | 0 0 0 0 0
dc 2/ 1 0 0 0 0 | 0 0 0 0 0
dc 2/ 2 1 0 0 0 | 0 0 0 0 0
dc 3/ 1 1 1 0 0 | 0 1 0 0 0
dc 3/ 2 1 1 0 0 | 1 0 0 0 0
dc 4/ 1 1 1 1 0 | 0 2 0 0 0
dc 4/ 2 2 1 1 0 | 1 1 0 0 0
dc 5/ 1 1 1 1 1 | 0 3 0 0 0
dc 5/ 2 3 1 1 1 | 1 2 0 0 0
*MODEL013 New 0 0 0-----------------------------------------------------------
"EQ M-D NONIDEAL" "" "" // name and alternate names of the model
"" // comments
2015-9-30 16:20:45 // date/time last stored
1 2 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A2" // default name for species 2
"2A = A2" 1 3 // name, group, analytic solution for its group, for reaction 1
-2 1 // stoichiometry for reaction 1
// Kinetic parameters
0 0 1.0000000000000000e+015 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 1, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) M(1) s(1) s(2) d(0, 1) e(0, 1) Ks(1) Ks(2) BM1(1) BM1(2)
// Dependent parameters for sedimentation velocity run (3,64)
M(2)=2*M(1)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) M(1) d(0, 1) e(0, 1) BM1(1)
// Dependent parameters for equilibrium run (4,88)
M(2)=2*M(1)
d(0, 2)=M(1)*d(0, 1)/M(1)
e(0, 2)=M(1)*e(0, 1)/M(1)
BM1(2)=M(1)*BM1(1)/M(1)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/2 1
Rxn 1 Species 2 1 | 2 -1
dc 1/ 1 1 0 | 0 0
dc 2/ 1 2 1 | 1 0
*MODEL014 New 0 0 0-----------------------------------------------------------
"EQ M-TET-OCT NONIDEAL" "" "" // name and alternate names of the model
"" // comments
2015-9-30 17:12:31 // date/time last stored
2 3 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"A8" // default name for species 3
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
"2A4 = A8" 1 0 // name, group, analytic solution for its group, for reaction 2
-4 1 0 // stoichiometry for reaction 1
0 -2 1 // stoichiometry for reaction 2
// Kinetic parameters
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
1 0 1.0000000000000000e+015 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 2, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) s(1) s(2) s(3) Ks(1) Ks(2) Ks(3) BM1(1) BM1(2) BM1(3)
// Dependent parameters for sedimentation velocity run (9,198)
M(1)=M(2)/4
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 1)=M(2)*d(0, 2)/(4*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 1)=M(2)*e(0, 2)/(4*M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) BM1(1)
// Dependent parameters for equilibrium run (11,246)
M(1)=M(2)/4
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 1)=M(2)*d(0, 2)/(4*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 1)=M(2)*e(0, 2)/(4*M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
BM1(2)=M(1)*BM1(1)/M(1)
BM1(3)=M(2)*BM1(2)/M(2)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/8 1/2 1
Rxn 1 Species 2 1 0 | 4 -1 0
Rxn 2 Species 3 2 1 | 8 0 -1
dc 1/ 1 1 0 0 | 0 0 0
dc 2/ 1 4 1 0 | 3 0 0
dc 3/ 1 8 2 1 | 7 0 0
*MODEL014 Edited 0 0 0-----------------------------------------------------------
"EQ M-TET-OCT NONIDEAL" "" "" // name and alternate names of the model
"" // comments
2015-9-30 17:13:23 // date/time last stored
2 3 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"A8" // default name for species 3
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
"2A4 = A8" 1 0 // name, group, analytic solution for its group, for reaction 2
-4 1 0 // stoichiometry for reaction 1
0 -2 1 // stoichiometry for reaction 2
// Kinetic parameters
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
1 0 1.0000000000000000e+015 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 2, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) M(1) s(1) s(2) s(3) d(0, 1) e(0, 1) Ks(1) Ks(2) Ks(3) BM1(1) BM1(2) BM1(3)
// Dependent parameters for sedimentation velocity run (6,128)
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) BM1(1)
// Dependent parameters for equilibrium run (11,246)
M(1)=M(2)/4
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 1)=M(2)*d(0, 2)/(4*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 1)=M(2)*e(0, 2)/(4*M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
BM1(2)=M(1)*BM1(1)/M(1)
BM1(3)=M(2)*BM1(2)/M(2)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/8 1/2 1
Rxn 1 Species 2 1 0 | 4 -1 0
Rxn 2 Species 3 2 1 | 8 0 -1
dc 1/ 1 1 0 0 | 0 0 0
dc 2/ 1 4 1 0 | 3 0 0
dc 3/ 1 8 2 1 | 7 0 0
*MODEL014 Edited 0 0 0-----------------------------------------------------------
"EQ M-TET-OCT NONIDEAL" "" "" // name and alternate names of the model
"" // comments
2015-9-30 17:14:32 // date/time last stored
2 3 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"A8" // default name for species 3
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
"2A4 = A8" 1 0 // name, group, analytic solution for its group, for reaction 2
-4 1 0 // stoichiometry for reaction 1
0 -2 1 // stoichiometry for reaction 2
// Kinetic parameters
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 2, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) M(1) s(1) s(2) s(3) d(0, 1) e(0, 1) Ks(1) Ks(2) Ks(3) BM1(1) BM1(2) BM1(3)
// Dependent parameters for sedimentation velocity run (6,128)
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) BM1(1)
// Dependent parameters for equilibrium run (11,246)
M(1)=M(2)/4
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 1)=M(2)*d(0, 2)/(4*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 1)=M(2)*e(0, 2)/(4*M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
BM1(2)=M(1)*BM1(1)/M(1)
BM1(3)=M(2)*BM1(2)/M(2)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/8 1/2 1
Rxn 1 Species 2 1 0 | 4 -1 0
Rxn 2 Species 3 2 1 | 8 0 -1
dc 1/ 1 1 0 0 | 0 0 0
dc 2/ 1 4 1 0 | 3 0 0
dc 3/ 1 8 2 1 | 7 0 0
*MODEL014 Edited 0 0 0-----------------------------------------------------------
"EQ M-TET-OCT NONIDEAL" "" "" // name and alternate names of the model
"" // comments
2015-9-30 17:15:28 // date/time last stored
2 3 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"A8" // default name for species 3
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
"2A4 = A8" 1 0 // name, group, analytic solution for its group, for reaction 2
-4 1 0 // stoichiometry for reaction 1
0 -2 1 // stoichiometry for reaction 2
// Kinetic parameters
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 2, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) M(1) s(1) s(2) s(3) d(0, 1) e(0, 1) Ks(1) Ks(2) Ks(3) BM1(1) BM1(2) BM1(3)
// Dependent parameters for sedimentation velocity run (6,128)
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) BM1(1)
// Dependent parameters for equilibrium run (11,246)
M(1)=M(2)/4
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 1)=M(2)*d(0, 2)/(4*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 1)=M(2)*e(0, 2)/(4*M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
BM1(2)=M(1)*BM1(1)/M(1)
BM1(3)=M(2)*BM1(2)/M(2)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/8 1/2 1
Rxn 1 Species 2 1 0 | 4 -1 0
Rxn 2 Species 3 2 1 | 8 0 -1
dc 1/ 1 1 0 0 | 0 0 0
dc 2/ 1 4 1 0 | 3 0 0
dc 3/ 1 8 2 1 | 7 0 0
*MODEL014 Edited 0 0 0-----------------------------------------------------------
"EQ M-TET-OCT NONIDEAL" "" "" // name and alternate names of the model
"" // comments
2015-9-30 17:16:51 // date/time last stored
2 3 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
"A4" // default name for species 2
"A8" // default name for species 3
"4A = A4" 1 0 // name, group, analytic solution for its group, for reaction 1
"2A4 = A8" 1 0 // name, group, analytic solution for its group, for reaction 2
-4 1 0 // stoichiometry for reaction 1
0 -2 1 // stoichiometry for reaction 2
// Kinetic parameters
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
1 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 2, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) M(1) s(1) s(2) s(3) d(0, 1) e(0, 1) Ks(1) Ks(2) Ks(3) BM1(1) BM1(2) BM1(3)
// Dependent parameters for sedimentation velocity run (6,128)
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) M(1) d(0, 1) e(0, 1) BM1(1)
// Dependent parameters for equilibrium run (8,176)
M(2)=4*M(1)
M(3)=2*M(2)
d(0, 2)=M(1)*d(0, 1)/M(1)
d(0, 3)=M(2)*d(0, 2)/M(2)
e(0, 2)=M(1)*e(0, 1)/M(1)
e(0, 3)=M(2)*e(0, 2)/M(2)
BM1(2)=M(1)*BM1(1)/M(1)
BM1(3)=M(2)*BM1(2)/M(2)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1/8 1/2 1
Rxn 1 Species 2 1 0 | 4 -1 0
Rxn 2 Species 3 2 1 | 8 0 -1
dc 1/ 1 1 0 0 | 0 0 0
dc 2/ 1 4 1 0 | 3 0 0
dc 3/ 1 8 2 1 | 7 0 0
*MODEL005 Edited 0 0 0-----------------------------------------------------------
"TNFa + 3R1" "" "" // name and alternate names of the model
"" // comments
2015-10-2 12:45:27 // date/time last stored
3 5 4 3 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"TNFa" // default name for species 1
"R1" // default name for species 2
"TNFaR1" // default name for species 3
"TNFaR12" // default name for species 4
"TNFaR13" // default name for species 5
"TNFa + R1 = TNFaR1" 1 0 // name, group, analytic solution for its group, for reaction 1
"R1 + TNFaR1 = TNFaR12" 1 0 // name, group, analytic solution for its group, for reaction 2
"R1 + TNFaR12 = TNFaR13" 1 0 // name, group, analytic solution for its group, for reaction 3
-1 -1 1 0 0 // stoichiometry for reaction 1
0 -1 -1 1 0 // stoichiometry for reaction 2
0 -1 0 -1 1 // stoichiometry for reaction 3
// Kinetic parameters
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 1, copy kr from rxn
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 2, copy kr from rxn
0 0 9.9999999999999997e+098 0 // fit, range of Keq for reaction 3, copy Keq from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kf for reaction 3, copy kf from rxn
0 0 9.9999999999999997e+098 0 // fit, range of kr for reaction 3, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0 5.0000000000000000e+001
0 3 0 0 0 3.2900000000000000e+000 0 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0 5.0000000000000000e+000
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0 5.0000000000000000e+000
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
3 2 0 2 0 2.7500000000000002e-001 0 5.0000000000000000e+000
3 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
4 2 0 2 0 2.7500000000000002e-001 0 5.0000000000000000e+000
4 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) s(1) s(2) s(3) s(4) s(5) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for equilibrium run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 3 -1 2 1 0
Cons 2 -2 1 -1 0 1
Rxn 1 Species 3 1 0 0 | 1 1 -1 0 0
Rxn 2 Species 4 1 1 0 | 1 2 0 -1 0
Rxn 3 Species 5 1 1 1 | 1 3 0 0 -1
dc 1/ 1 1 0 0 0 | 0 0 0 0 0
dc 1/ 2 0 0 0 0 | 0 0 0 0 0
dc 2/ 1 0 0 0 0 | 0 0 0 0 0
dc 2/ 2 1 0 0 0 | 0 0 0 0 0
dc 3/ 1 1 1 0 0 | 0 1 0 0 0
dc 3/ 2 1 1 0 0 | 1 0 0 0 0
dc 4/ 1 1 1 1 0 | 0 2 0 0 0
dc 4/ 2 2 1 1 0 | 1 1 0 0 0
dc 5/ 1 1 1 1 1 | 0 3 0 0 0
dc 5/ 2 3 1 1 1 | 1 2 0 0 0
*MODEL012 Edited 0 0 0-----------------------------------------------------------
"TNFa + 3R1 (imported)" "" "" // name and alternate names of the model
"" // comments
2015-10-2 14:08:09 // date/time last stored
3 5 4 4 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"TNFa" // default name for species 1
"R1" // default name for species 2
"TNFa(R1)" // default name for species 3
"TNFa(R1)2" // default name for species 4
"TNFa(R1)3" // default name for species 5
"TNFa + R1 = TNFa(R1)" 1 0 // name, group, analytic solution for its group, for reaction 1
"R1 + TNFa(R1) = TNFa(R1)2" 1 0 // name, group, analytic solution for its group, for reaction 2
"R1 + TNFa(R1)2 = TNFa(R1)3" 1 0 // name, group, analytic solution for its group, for reaction 3
-1 -1 1 0 0 // stoichiometry for reaction 1
0 -1 -1 1 0 // stoichiometry for reaction 2
0 -1 0 -1 1 // stoichiometry for reaction 3
// Kinetic parameters
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 1, copy kr from rxn
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 2, copy kr from rxn
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 3, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 3, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 3, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
3 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
4 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) s(1) s(2) s(3) s(4) s(5) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2) BM1(1) BM1(2) BM1(3) BM1(4) BM1(5)
// Dependent parameters for equilibrium run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 3 -1 2 1 0
Cons 2 -2 1 -1 0 1
Rxn 1 Species 3 1 0 0 | 1 1 -1 0 0
Rxn 2 Species 4 1 1 0 | 1 2 0 -1 0
Rxn 3 Species 5 1 1 1 | 1 3 0 0 -1
dc 1/ 1 1 0 0 0 | 0 0 0 0 0
dc 1/ 2 0 0 0 0 | 0 0 0 0 0
dc 2/ 1 0 0 0 0 | 0 0 0 0 0
dc 2/ 2 1 0 0 0 | 0 0 0 0 0
dc 3/ 1 1 1 0 0 | 0 1 0 0 0
dc 3/ 2 1 1 0 0 | 1 0 0 0 0
dc 4/ 1 1 1 1 0 | 0 2 0 0 0
dc 4/ 2 2 1 1 0 | 1 1 0 0 0
dc 5/ 1 1 1 1 1 | 0 3 0 0 0
dc 5/ 2 3 1 1 1 | 1 2 0 0 0
*MODEL012 Edited 0 0 0-----------------------------------------------------------
"TNFa + 3R1 (imported)" "" "" // name and alternate names of the model
"" // comments
2015-10-2 14:09:24 // date/time last stored
3 5 4 4 2 // reactions, species, params/species (vel), params/species (eq), components
1 2 // species numbers of components
"TNFa" // default name for species 1
"R1" // default name for species 2
"TNFa(R1)" // default name for species 3
"TNFa(R1)2" // default name for species 4
"TNFa(R1)3" // default name for species 5
"TNFa + R1 = TNFa(R1)" 1 0 // name, group, analytic solution for its group, for reaction 1
"R1 + TNFa(R1) = TNFa(R1)2" 1 0 // name, group, analytic solution for its group, for reaction 2
"R1 + TNFa(R1)2 = TNFa(R1)3" 1 0 // name, group, analytic solution for its group, for reaction 3
-1 -1 1 0 0 // stoichiometry for reaction 1
0 -1 -1 1 0 // stoichiometry for reaction 2
0 -1 0 -1 1 // stoichiometry for reaction 3
// Kinetic parameters
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 1, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 1, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 1, copy kr from rxn
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 2, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 2, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 2, copy kr from rxn
0 100 1.0000000000000000e+015 0 // fit, range of Keq for reaction 3, copy Keq from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kf for reaction 3, copy kf from rxn
0 0 1.0000000000000000e+015 0 // fit, range of kr for reaction 3, copy kr from rxn
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
1 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
2 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
3 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
4 2 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 3 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
// Independent parameters for sedimentation velocity run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) s(1) s(2) s(3) s(4) s(5) d(0, 1) d(0, 2) e(0, 1) e(0, 2)
// Dependent parameters for sedimentation velocity run (9,333)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
1 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
1 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
1 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
1 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
2 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
2 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
2 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
2 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
3 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
3 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
3 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
3 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
4 0 0 1 0 1.0000000000000000e+004 100 1.0000000000000000e+008
4 1 0 2 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
4 2 0 2 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
4 3 0 2 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
K(1) kf(1) kr(1) K(2) kf(2) kr(2) K(3) kf(3) kr(3) M(1) M(2) d(0, 1) d(0, 2) e(0, 1) e(0, 2) BM1(1) BM1(2)
// Dependent parameters for equilibrium run (12,468)
M(3)=M(1)+M(2)
M(4)=M(2)+M(3)
M(5)=M(2)+M(4)
d(0, 3)=(M(1)*d(0, 1)+M(2)*d(0, 2))/(M(1)+M(2))
d(0, 4)=(M(2)*d(0, 2)+M(3)*d(0, 3))/(M(2)+M(3))
d(0, 5)=(M(2)*d(0, 2)+M(4)*d(0, 4))/(M(2)+M(4))
e(0, 3)=(M(1)*e(0, 1)+M(2)*e(0, 2))/(M(1)+M(2))
e(0, 4)=(M(2)*e(0, 2)+M(3)*e(0, 3))/(M(2)+M(3))
e(0, 5)=(M(2)*e(0, 2)+M(4)*e(0, 4))/(M(2)+M(4))
BM1(3)=(M(1)*BM1(1)+M(2)*BM1(2))/(M(1)+M(2))
BM1(4)=(M(2)*BM1(2)+M(3)*BM1(3))/(M(2)+M(3))
BM1(5)=(M(2)*BM1(2)+M(4)*BM1(4))/(M(2)+M(4))
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 3 -1 2 1 0
Cons 2 -2 1 -1 0 1
Rxn 1 Species 3 1 0 0 | 1 1 -1 0 0
Rxn 2 Species 4 1 1 0 | 1 2 0 -1 0
Rxn 3 Species 5 1 1 1 | 1 3 0 0 -1
dc 1/ 1 1 0 0 0 | 0 0 0 0 0
dc 1/ 2 0 0 0 0 | 0 0 0 0 0
dc 2/ 1 0 0 0 0 | 0 0 0 0 0
dc 2/ 2 1 0 0 0 | 0 0 0 0 0
dc 3/ 1 1 1 0 0 | 0 1 0 0 0
dc 3/ 2 1 1 0 0 | 1 0 0 0 0
dc 4/ 1 1 1 1 0 | 0 2 0 0 0
dc 4/ 2 2 1 1 0 | 1 1 0 0 0
dc 5/ 1 1 1 1 1 | 0 3 0 0 0
dc 5/ 2 3 1 1 1 | 1 2 0 0 0
*MODEL015 New 0 0 0-----------------------------------------------------------
"1 COMP NON-IDEAL" "" "" // name and alternate names of the model
"" // comments
2015-10-2 15:17:31 // date/time last stored
0 1 6 4 1 // reactions, species, params/species (vel), params/species (eq), components
1 // species numbers of components
"A" // default name for species 1
// Kinetic parameters
// Parameter names and info for sedimentation velocity run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Sedimentation coeff. (S)" "s" "s" // name, brief name, eqn symbol for parameter 2
30 1.0000000000000000e-013 // type of, scale for parameter 2
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 3
15 1.0000000000000000e+000 // type of, scale for parameter 3
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 4
6 1.0000000000000000e+000 // type of, scale for parameter 4
"Hydr. conc. dep., Ks (mL/mg)" "Ks" "Ks" // name, brief name, eqn symbol for parameter 5
80 1.0000000000000000e+000 // type of, scale for parameter 5
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 6
81 1.0000000000000000e+000 // type of, scale for parameter 6
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.0000000000000000e+000 0.1 5.0000000000000000e+004
0 2 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 3 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 4 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
0 5 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for sedimentation velocity run
M(1) s(1) d(0, 1) e(0, 1) Ks(1) BM1(1)
// Dependent parameters for sedimentation velocity run (0,0)
// non-zero values are errors in the above model
// Parameter names and info for equilibrium run
"Molar mass (g/mole)" "MW" "M" // name, brief name, eqn symbol for parameter 1
4 1.0000000000000000e+000 // type of, scale for parameter 1
"Density increment" "DenInc" "d" // name, brief name, eqn symbol for parameter 2
15 1.0000000000000000e+000 // type of, scale for parameter 2
"Mass extinction coeff." "ex" "e" // name, brief name, eqn symbol for parameter 3
6 1.0000000000000000e+000 // type of, scale for parameter 3
"2nd virial coeff., BM1 (mL/mg)" "BM1" "BM1" // name, brief name, eqn symbol for parameter 4
81 1.0000000000000000e+000 // type of, scale for parameter 4
// Molecular parameters: species, param, fit, calc type, rq, default, range
0 0 0 0 0 1.0000000000000000e+004 100 1.0000000000000000e+008
0 1 0 0 0 2.7500000000000002e-001 0.2 5.0000000000000000e-001
0 2 0 0 0 3.2900000000000000e+000 0.01 2.0000000000000000e+001
0 3 0 0 0 0.0000000000000000e+000 0 1.0000000000000000e+002
// Independent parameters for equilibrium run
M(1) d(0, 1) e(0, 1) BM1(1)
// Dependent parameters for equilibrium run (0,0)
// non-zero values are errors in the above model
0 0 // allow fitting of meniscus and base for equilibrium runs
// Equilibrium information
Cons 1 1
dc 1/ 1 1 | 0
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